PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Psi011648
Organism
Picea sitchensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family GeBP
Protein Properties Length: 362aa    MW: 41148.7 Da    PI: 8.9177
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Picea_sitchensis-23324PU_refplantGDBView CDS
gnl|UG|Psi#S55421255PU_unrefUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57348.42.7e-15115211297
     DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksg....kepsfskehdqkifelskkiWg 97 
                +f + ws eDe +l  +l+ ++   g   + ++ afye++k+ + f++s++ql +K+rr++ +f +  +k+++g    ++++ +++++   f++ k+iWg
  Psi011648 115 KFPQTWSAEDETSLANALLVCAGGGG---QVNMAAFYEQAKDALGFDISNTQLYDKMRRMRSRFWTIHSKISEGsvpeDQFAYRSPNEAALFKVWKQIWG 211
                78999****************65555...679***********************************999666511116677899**************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045046.0E-16116211IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
XGADRHSNGP FENPNGISVG PNFSSSSWKK NNGVEAKRNR GDRDKDQLTP PAAKRTNPSE  60
GNGKKSQSDL EELVAQTYAK GISILHQKHR DDDTRRSKSK KKKKKKAEKS GEQKKFPQTW  120
SAEDETSLAN ALLVCAGGGG QVNMAAFYEQ AKDALGFDIS NTQLYDKMRR MRSRFWTIHS  180
KISEGSVPED QFAYRSPNEA ALFKVWKQIW GINVKDHHEE EDLHNTGQNN WDYFIRDEDH  240
RPNESRAPVV ENMMEEVQSN IEALINNFFR RISAAANLQP FSSGFGAKAG NGSCLCSSLS  300
GRMKELIEGV RSVKEFPWLD EAEARALQQK WHNNRVEELR VFRRSLELLQ EECKLCLKEL  360
EK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194100RRSKSKK
299105KKKKKKK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA9NZ241e-166A9NZ24_PICSI; Putative uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.23e-11DNA-binding storekeeper protein-related transcriptional regulator